Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 REXO1L2P-201ENST00000425429 2069 ntBASIC14.94□□□□□ -0.02
SLC28A1O00337 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC28A1O00337 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC28A1O00337 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC28A1O00337 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC28A1O00337 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC28A1O00337 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 ACE3P-201ENST00000423435 1973 ntBASIC14.93□□□□□ -0.02
SLC28A1O00337 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 AC069262.1-201ENST00000539058 672 ntBASIC14.93□□□□□ -0.02
SLC28A1O00337 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.93□□□□□ -0.02
SLC28A1O00337 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC28A1O00337 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A1O00337 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A1O00337 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A1O00337 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 AL009178.2-201ENST00000597278 2719 ntBASIC14.92□□□□□ -0.02
SLC28A1O00337 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 RPL37AP1-201ENST00000412502 279 ntBASIC14.92□□□□□ -0.02
SLC28A1O00337 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 KRT18P64-201ENST00000434946 1219 ntBASIC14.92□□□□□ -0.02
SLC28A1O00337 AP000347.1-202ENST00000435868 847 ntBASIC14.92□□□□□ -0.02
SLC28A1O00337 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A1O00337 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms