Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RCCD1A6NED2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RCCD1A6NED2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RCCD1A6NED2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.46■□□□□ 0.22
RCCD1A6NED2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.46■□□□□ 0.22
RCCD1A6NED2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RCCD1A6NED2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC004461.1-201ENST00000412461 403 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 AL627223.1-201ENST00000416693 442 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC007967.4-201ENST00000614700 386 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 AL513210.1-201ENST00000629608 234 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 AC012508.2-201ENST00000567613 1472 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 Z97205.2-201ENST00000564697 1639 ntBASIC16.45■□□□□ 0.22
RCCD1A6NED2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RCCD1A6NED2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
RCCD1A6NED2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 AL022342.1-201ENST00000400363 863 ntBASIC16.44■□□□□ 0.22
RCCD1A6NED2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 KRT18P32-201ENST00000424695 1287 ntBASIC16.44■□□□□ 0.22
RCCD1A6NED2 MTND6P24-201ENST00000440466 518 ntBASIC16.44■□□□□ 0.22
RCCD1A6NED2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 POLD2P1-201ENST00000511220 997 ntBASIC16.44■□□□□ 0.22
RCCD1A6NED2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.44■□□□□ 0.22
RCCD1A6NED2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RCCD1A6NED2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms