Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC111170.3-201ENST00000624282 2464 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 LINC00638-201ENST00000555578 2518 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC090505.1-201ENST00000430515 1834 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 U82695.1-201ENST00000635752 1889 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 GOLGA2P9-201ENST00000596977 1937 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC011467.4-201ENST00000594891 528 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC009154.2-201ENST00000621177 724 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC112497.1-201ENST00000624824 639 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC060814.4-201ENST00000594169 2163 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AC008620.2-201ENST00000510294 1569 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AL805961.2-201ENST00000642139 4817 ntBASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LINC01558Q9Y6Z2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms