Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC232323.1-201ENST00000540724 2099 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 REXO1L5P-201ENST00000622260 2098 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC007292.2-201ENST00000593524 1812 ntBASIC17.66■□□□□ 0.42
CLIC4Q9Y696 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 MIR943-201ENST00000401286 94 ntBASIC17.66■□□□□ 0.42
CLIC4Q9Y696 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC009407.1-201ENST00000568958 598 ntBASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIC4Q9Y696 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AC104457.1-201ENST00000401024 814 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 FAM86GP-201ENST00000448322 971 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AL589987.1-201ENST00000453380 819 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 SPDYE18-201ENST00000510091 1050 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 ZNF890P-202ENST00000530367 1156 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AC011467.4-201ENST00000594891 528 ntBASIC17.65■□□□□ 0.42
CLIC4Q9Y696 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIC4Q9Y696 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLIC4Q9Y696 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.64■□□□□ 0.42
CLIC4Q9Y696 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLIC4Q9Y696 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms