Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 AL354989.2-201ENST00000435838 1540 ntBASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 PRAL-201ENST00000624952 3286 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 AC104457.1-201ENST00000401024 814 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 BTBD6P1-201ENST00000412176 1267 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 GPAA1P2-201ENST00000417923 928 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 AC007969.1-201ENST00000433675 447 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 AC006033.1-201ENST00000440505 426 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 CNN2P10-201ENST00000443067 918 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 AL591846.1-201ENST00000451736 433 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 MIR3615-201ENST00000581999 87 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 EEF1DP1-201ENST00000585891 896 ntBASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CYP39A1Q9NYL5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC105250.1-201ENST00000509378 2057 ntBASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 RPSAP36-202ENST00000494591 1261 ntBASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC022616.1-201ENST00000518688 554 ntBASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 AC103810.3-201ENST00000583567 96 ntBASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CYP39A1Q9NYL5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CYP39A1Q9NYL5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CYP39A1Q9NYL5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CYP39A1Q9NYL5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CYP39A1Q9NYL5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms