Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 MIR5189-201ENST00000577370 114 ntBASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 CICP11-201ENST00000434745 2827 ntBASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VAT1LQ9HCJ6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 BCRP2-202ENST00000447763 634 ntBASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 CROCCP4-201ENST00000457096 498 ntBASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 BCRP6-201ENST00000510112 632 ntBASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 BCRP7-201ENST00000511549 544 ntBASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 BTNL10-201ENST00000595971 695 ntBASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VAT1LQ9HCJ6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAT1LQ9HCJ6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAT1LQ9HCJ6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VAT1LQ9HCJ6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.89■□□□□ 0.46
VAT1LQ9HCJ6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 USP32P1-208ENST00000506594 1164 ntBASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RAB43P1-201ENST00000561790 589 ntBASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AP001063.1-201ENST00000568332 529 ntBASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC015936.2-201ENST00000593177 259 ntBASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AL162274.1-201ENST00000617191 1098 ntBASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms