Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 EIF3FP3-201ENST00000434851 1086 ntBASIC16.61■□□□□ 0.25
NXF3Q9H4D5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 AL355994.2-201ENST00000447882 704 ntBASIC16.61■□□□□ 0.25
NXF3Q9H4D5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 RNA5SP486-201ENST00000515961 83 ntBASIC16.61■□□□□ 0.25
NXF3Q9H4D5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 MIR4538-201ENST00000581377 78 ntBASIC16.61■□□□□ 0.25
NXF3Q9H4D5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 AC132938.4-201ENST00000623835 848 ntBASIC16.61■□□□□ 0.25
NXF3Q9H4D5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AC104457.1-201ENST00000401024 814 ntBASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 AC010328.2-201ENST00000597698 1111 ntBASIC16.6■□□□□ 0.25
NXF3Q9H4D5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NXF3Q9H4D5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 AC020658.6-201ENST00000623564 1870 ntBASIC16.59■□□□□ 0.25
NXF3Q9H4D5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.59■□□□□ 0.25
NXF3Q9H4D5 HLA-K-203ENST00000430151 1046 ntBASIC16.59■□□□□ 0.25
NXF3Q9H4D5 ACTBP11-201ENST00000436287 1126 ntBASIC16.59■□□□□ 0.25
NXF3Q9H4D5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms