Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 FO538757.1-201ENST00000623083 1397 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC006486.2-201ENST00000624246 2199 ntBASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AL080243.2-201ENST00000418783 582 ntBASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 HLA-V-204ENST00000476601 1289 ntBASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC68Q9H2F9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC112693.3-201ENST00000624819 1983 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 FAM86GP-201ENST00000448322 971 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 KLF2P3-201ENST00000451977 1087 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 RN7SL618P-201ENST00000477850 296 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC069120.2-201ENST00000524091 540 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AC073592.8-201ENST00000624126 511 ntBASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC68Q9H2F9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms