Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC007191.1-201ENST00000623179 2995 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC136604.1-201ENST00000418535 575 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SPDYE11-202ENST00000450699 704 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC106730.1-201ENST00000566722 1090 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AP000842.3-202ENST00000569238 1080 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SPDYE9P-201ENST00000570642 692 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC027601.4-201ENST00000611259 610 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SPDYE10P-202ENST00000612005 668 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SPDYE8P-202ENST00000612377 668 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 FAM197Y3-203ENST00000618346 717 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC091812.2-201ENST00000619081 385 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 AL607033.1-201ENST00000623900 1599 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms