Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AC084364.1-201ENST00000551967 1556 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 RN7SL692P-201ENST00000464677 288 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 ELK1P1-201ENST00000485699 580 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AL161772.1-201ENST00000610494 4412 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 INTS4P2-202ENST00000614726 2019 ntBASIC13.93□□□□□ -0.18
CPNE4Q96A23 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC134915.1-201ENST00000426461 574 ntBASIC13.92□□□□□ -0.18
CPNE4Q96A23 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC011495.1-201ENST00000498085 584 ntBASIC13.92□□□□□ -0.18
CPNE4Q96A23 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 WASH4P-201ENST00000564273 1246 ntBASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC133539.2-201ENST00000604757 467 ntBASIC13.92□□□□□ -0.18
CPNE4Q96A23 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CPNE4Q96A23 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.92□□□□□ -0.18
CPNE4Q96A23 AC105233.6-201ENST00000642093 218 ntBASIC13.92□□□□□ -0.18
CPNE4Q96A23 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms