Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHPFQ8IZ52 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 MIR1908-201ENST00000410394 80 ntBASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AC010328.2-201ENST00000597698 1111 ntBASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.76■□□□□ 0.11
CHPFQ8IZ52 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHPFQ8IZ52 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AC069224.1-201ENST00000566372 1715 ntBASIC15.75■□□□□ 0.11
CHPFQ8IZ52 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AP005019.2-201ENST00000615104 511 ntBASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 AL138799.1-201ENST00000448213 1675 ntBASIC15.75■□□□□ 0.11
CHPFQ8IZ52 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CHPFQ8IZ52 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms