Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 AC133539.2-201ENST00000604757 467 ntBASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC144BQ3MJ40 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 BNIP3P42-201ENST00000454982 569 ntBASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 SLC25A47P1-201ENST00000531577 414 ntBASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 BNIP3P29-201ENST00000598302 571 ntBASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AC233724.13-201ENST00000598383 410 ntBASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AC011447.5-201ENST00000616168 564 ntBASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC144BQ3MJ40 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 BNIP3P1-202ENST00000550043 1585 ntBASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 AL162726.2-201ENST00000438986 1017 ntBASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 CU634019.7-201ENST00000624153 1185 ntBASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 FP236241.2-201ENST00000624906 1185 ntBASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC144BQ3MJ40 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.96■□□□□ 0.46
CCDC144BQ3MJ40 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC144BQ3MJ40 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC144BQ3MJ40 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms