Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.9□□□□□ -0.18
SCN1BQ07699 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.9□□□□□ -0.18
SCN1BQ07699 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.9□□□□□ -0.18
SCN1BQ07699 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SCN1BQ07699 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SCN1BQ07699 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SCN1BQ07699 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.9□□□□□ -0.18
SCN1BQ07699 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.9□□□□□ -0.18
SCN1BQ07699 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SCN1BQ07699 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.9□□□□□ -0.18
SCN1BQ07699 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
SCN1BQ07699 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
SCN1BQ07699 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SCN1BQ07699 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
SCN1BQ07699 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 RNU1-129P-201ENST00000384064 167 ntBASIC13.89□□□□□ -0.19
SCN1BQ07699 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SCN1BQ07699 FAM8A3P-201ENST00000427218 844 ntBASIC13.89□□□□□ -0.19
SCN1BQ07699 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.89□□□□□ -0.19
SCN1BQ07699 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 U1.21-201ENST00000580816 167 ntBASIC13.89□□□□□ -0.19
SCN1BQ07699 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.89□□□□□ -0.19
SCN1BQ07699 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.89□□□□□ -0.19
SCN1BQ07699 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 CICP8-201ENST00000455800 2813 ntBASIC13.89□□□□□ -0.19
SCN1BQ07699 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SCN1BQ07699 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SCN1BQ07699 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SCN1BQ07699 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 AC009078.2-202ENST00000463353 338 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms