Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHATP28329 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHATP28329 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.29□□□□□ -0.28
CHATP28329 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHATP28329 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.29□□□□□ -0.28
CHATP28329 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHATP28329 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHATP28329 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHATP28329 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CHATP28329 MROH4P-201ENST00000431302 1578 ntBASIC13.28□□□□□ -0.28
CHATP28329 AL607033.1-201ENST00000623900 1599 ntBASIC13.28□□□□□ -0.28
CHATP28329 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 AC023274.1-201ENST00000418278 595 ntBASIC13.28□□□□□ -0.28
CHATP28329 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.28□□□□□ -0.28
CHATP28329 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.28□□□□□ -0.28
CHATP28329 AC092183.1-201ENST00000469884 875 ntBASIC13.28□□□□□ -0.28
CHATP28329 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.28□□□□□ -0.28
CHATP28329 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.28□□□□□ -0.28
CHATP28329 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 ZBED1P1-201ENST00000502364 1930 ntBASIC13.28□□□□□ -0.28
CHATP28329 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CHATP28329 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.28□□□□□ -0.28
CHATP28329 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHATP28329 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CHATP28329 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.27□□□□□ -0.28
CHATP28329 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.27□□□□□ -0.28
CHATP28329 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
CHATP28329 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHATP28329 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CHATP28329 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CHATP28329 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 RPL5P21-201ENST00000404620 815 ntBASIC13.27□□□□□ -0.29
CHATP28329 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.27□□□□□ -0.29
CHATP28329 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 TIMM8BP1-201ENST00000452384 211 ntBASIC13.27□□□□□ -0.29
CHATP28329 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.27□□□□□ -0.29
CHATP28329 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 SLC25A39P2-201ENST00000537614 270 ntBASIC13.27□□□□□ -0.29
CHATP28329 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.27□□□□□ -0.29
CHATP28329 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms