Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AP3S2-216ENST00000617003 1561 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 FAM58CP-201ENST00000435741 640 ntBASIC13.17□□□□□ -0.3
HIST1H1DP16402 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 MTHFR-210ENST00000641407 2387 ntBASIC13.17□□□□□ -0.3
HIST1H1DP16402 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 AC117489.1-201ENST00000625169 3217 ntBASIC13.17□□□□□ -0.3
HIST1H1DP16402 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1DP16402 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 CICP4-201ENST00000447359 2812 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 RPL13AP23-201ENST00000480739 586 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AC079140.1-201ENST00000508039 487 ntBASIC13.16□□□□□ -0.3
HIST1H1DP16402 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H1DP16402 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms