Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.14□□□□□ -0.47
CD28P10747 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 AC106760.1-201ENST00000508690 800 ntBASIC12.14□□□□□ -0.47
CD28P10747 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.14□□□□□ -0.47
CD28P10747 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CD28P10747 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 HYMAI-201ENST00000635591 3347 ntBASIC12.14□□□□□ -0.47
CD28P10747 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD28P10747 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.14□□□□□ -0.47
CD28P10747 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD28P10747 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD28P10747 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD28P10747 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CD28P10747 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD28P10747 DRD5P1-201ENST00000456605 1438 ntBASIC12.13□□□□□ -0.47
CD28P10747 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD28P10747 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AC016694.1-201ENST00000434179 700 ntBASIC12.13□□□□□ -0.47
CD28P10747 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 AC026410.3-201ENST00000514280 936 ntBASIC12.13□□□□□ -0.47
CD28P10747 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.13□□□□□ -0.47
CD28P10747 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CD28P10747 AL583810.1-201ENST00000553344 1045 ntBASIC12.13□□□□□ -0.47
CD28P10747 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.13□□□□□ -0.47
CD28P10747 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.13□□□□□ -0.47
CD28P10747 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.13□□□□□ -0.47
CD28P10747 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.13□□□□□ -0.47
CD28P10747 MIR4538-201ENST00000581377 78 ntBASIC12.13□□□□□ -0.47
CD28P10747 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AC107373.2-201ENST00000607735 490 ntBASIC12.13□□□□□ -0.47
CD28P10747 AC244669.2-201ENST00000612320 853 ntBASIC12.13□□□□□ -0.47
CD28P10747 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AC006449.5-201ENST00000610658 2098 ntBASIC12.13□□□□□ -0.47
CD28P10747 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
CD28P10747 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.13□□□□□ -0.47
CD28P10747 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CD28P10747 AC026691.1-201ENST00000602502 2017 ntBASIC12.13□□□□□ -0.47
CD28P10747 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD28P10747 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD28P10747 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms