Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 AC100757.3-201ENST00000622361 1406 ntBASIC16.28■□□□□ 0.2
RARAP10276 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
RARAP10276 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.28■□□□□ 0.2
RARAP10276 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 AC044860.1-202ENST00000559481 777 ntBASIC16.28■□□□□ 0.2
RARAP10276 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 AC074044.1-201ENST00000609673 707 ntBASIC16.28■□□□□ 0.2
RARAP10276 AC006538.3-201ENST00000612495 578 ntBASIC16.28■□□□□ 0.2
RARAP10276 AL590560.3-201ENST00000623350 461 ntBASIC16.28■□□□□ 0.2
RARAP10276 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RARAP10276 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RARAP10276 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.28■□□□□ 0.2
RARAP10276 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RARAP10276 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RARAP10276 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RARAP10276 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RARAP10276 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RARAP10276 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.27■□□□□ 0.2
RARAP10276 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.27■□□□□ 0.2
RARAP10276 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RARAP10276 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.27■□□□□ 0.2
RARAP10276 AC015922.1-201ENST00000421102 1152 ntBASIC16.27■□□□□ 0.2
RARAP10276 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.27■□□□□ 0.2
RARAP10276 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.27■□□□□ 0.2
RARAP10276 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.27■□□□□ 0.2
RARAP10276 SDHAP3-202ENST00000515467 728 ntBASIC16.27■□□□□ 0.2
RARAP10276 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.27■□□□□ 0.2
RARAP10276 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RARAP10276 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.27■□□□□ 0.2
RARAP10276 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RARAP10276 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.27■□□□□ 0.2
RARAP10276 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RARAP10276 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.27■□□□□ 0.19
RARAP10276 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RARAP10276 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RARAP10276 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
RARAP10276 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.26■□□□□ 0.19
RARAP10276 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.26■□□□□ 0.19
RARAP10276 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.26■□□□□ 0.19
RARAP10276 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.26■□□□□ 0.19
RARAP10276 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.26■□□□□ 0.19
RARAP10276 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.26■□□□□ 0.19
RARAP10276 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms