Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.27■□□□□ 0.2
LMNAP02545 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.27■□□□□ 0.2
LMNAP02545 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LMNAP02545 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.27■□□□□ 0.2
LMNAP02545 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
LMNAP02545 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LMNAP02545 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LMNAP02545 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.27■□□□□ 0.2
LMNAP02545 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.27■□□□□ 0.2
LMNAP02545 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMNAP02545 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.27■□□□□ 0.2
LMNAP02545 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.27■□□□□ 0.2
LMNAP02545 KRT8P13-201ENST00000463294 1010 ntBASIC16.27■□□□□ 0.2
LMNAP02545 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.27■□□□□ 0.2
LMNAP02545 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.27■□□□□ 0.2
LMNAP02545 AL022328.1-201ENST00000610050 478 ntBASIC16.27■□□□□ 0.2
LMNAP02545 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.27■□□□□ 0.2
LMNAP02545 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.27■□□□□ 0.2
LMNAP02545 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LMNAP02545 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.27■□□□□ 0.19
LMNAP02545 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.27■□□□□ 0.19
LMNAP02545 CLK3P2-201ENST00000427566 1453 ntBASIC16.27■□□□□ 0.19
LMNAP02545 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMNAP02545 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LMNAP02545 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LMNAP02545 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.27■□□□□ 0.19
LMNAP02545 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 CDC14C-201ENST00000428251 1719 ntBASIC16.26■□□□□ 0.19
LMNAP02545 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.26■□□□□ 0.19
LMNAP02545 AC007551.1-201ENST00000457394 519 ntBASIC16.26■□□□□ 0.19
LMNAP02545 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.26■□□□□ 0.19
LMNAP02545 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.26■□□□□ 0.19
LMNAP02545 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.26■□□□□ 0.19
LMNAP02545 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 CYP2A7P1-201ENST00000595391 815 ntBASIC16.26■□□□□ 0.19
LMNAP02545 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMNAP02545 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LMNAP02545 AC073439.1-201ENST00000624121 1774 ntBASIC16.26■□□□□ 0.19
LMNAP02545 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LMNAP02545 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 GRK6P1-201ENST00000400595 1711 ntBASIC16.25■□□□□ 0.19
LMNAP02545 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms