Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RFPL1O75677 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.58■□□□□ 0.08
RFPL1O75677 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RFPL1O75677 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 HIST3H2BA-201ENST00000436555 524 ntBASIC15.58■□□□□ 0.08
RFPL1O75677 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 UGT1A2P-201ENST00000454886 866 ntBASIC15.58■□□□□ 0.08
RFPL1O75677 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 RARRES2P9-201ENST00000565168 469 ntBASIC15.58■□□□□ 0.08
RFPL1O75677 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RFPL1O75677 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.58■□□□□ 0.08
RFPL1O75677 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFPL1O75677 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 NFIC-211ENST00000641145 8399 ntBASIC15.57■□□□□ 0.08
RFPL1O75677 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 REXO1L2P-201ENST00000425429 2069 ntBASIC15.57■□□□□ 0.08
RFPL1O75677 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RFPL1O75677 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 MIR661-201ENST00000384842 89 ntBASIC15.57■□□□□ 0.08
RFPL1O75677 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 ALG1L8P-201ENST00000533887 760 ntBASIC15.57■□□□□ 0.08
RFPL1O75677 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 BANF1P1-201ENST00000553684 263 ntBASIC15.57■□□□□ 0.08
RFPL1O75677 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.57■□□□□ 0.08
RFPL1O75677 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.57■□□□□ 0.08
RFPL1O75677 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.57■□□□□ 0.08
RFPL1O75677 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.57■□□□□ 0.08
RFPL1O75677 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFPL1O75677 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFPL1O75677 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RFPL1O75677 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms