Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN9O14815 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 TOMM22P5-201ENST00000416399 439 ntBASIC16.43■□□□□ 0.22
CAPN9O14815 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.43■□□□□ 0.22
CAPN9O14815 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN9O14815 AL589987.1-201ENST00000453380 819 ntBASIC16.43■□□□□ 0.22
CAPN9O14815 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN9O14815 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.43■□□□□ 0.22
CAPN9O14815 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.43■□□□□ 0.22
CAPN9O14815 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CAPN9O14815 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN9O14815 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN9O14815 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CAPN9O14815 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN9O14815 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN9O14815 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN9O14815 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CAPN9O14815 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 MIR661-201ENST00000384842 89 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 MEP1AP4-201ENST00000423244 1087 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 SPTLC1P1-201ENST00000447199 261 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN9O14815 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CAPN9O14815 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN9O14815 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN9O14815 AC138969.3-201ENST00000546612 1459 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 AC138932.2-201ENST00000548268 1459 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 AC126755.4-201ENST00000549796 1459 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 AC007541.1-201ENST00000570282 1469 ntBASIC16.42■□□□□ 0.22
CAPN9O14815 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CAPN9O14815 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN9O14815 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 AC093004.1-201ENST00000508850 424 ntBASIC16.41■□□□□ 0.22
CAPN9O14815 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.41■□□□□ 0.22
CAPN9O14815 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.41■□□□□ 0.22
CAPN9O14815 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.41■□□□□ 0.22
CAPN9O14815 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN9O14815 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN9O14815 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN9O14815 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms