Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 HADH-212ENST00000638621 741 ntTSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AC069224.1-201ENST00000566372 1715 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AC008406.3-201ENST00000620001 1374 ntBASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC8.56□□□□□ -1.04
CHKB-CPT1BH3BT56 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AL357140.3-201ENST00000639753 1983 ntBASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 HSCB-202ENST00000398941 955 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SUDS3P1-201ENST00000505831 966 ntBASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 KRT18P61-201ENST00000585825 1298 ntBASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC060766.5-201ENST00000590539 871 ntBASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC010240.3-201ENST00000607688 395 ntBASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CHKB-CPT1BH3BT56 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms