Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 HYMAI-201ENST00000635591 3347 ntBASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 RPS2P32-201ENST00000439199 892 ntBASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AL049840.4-201ENST00000602422 811 ntBASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 INTS4P2-202ENST00000614726 2019 ntBASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA3F8WFD2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 CICP13-201ENST00000422015 2789 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AC018665.1-201ENST00000622927 1362 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 SOCS2P1-201ENST00000417727 557 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 SLC25A47P1-201ENST00000531577 414 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 MIR4313-201ENST00000580760 101 ntBASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA3F8WFD2 AC097359.3-201ENST00000603982 1210 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms