Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01546A6NGU7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC105233.2-201ENST00000523697 349 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AF228730.5-201ENST00000530288 346 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 OR7E14P-202ENST00000530490 1290 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC008735.5-201ENST00000623544 497 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC005593.1-201ENST00000624894 515 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 BEND3P3-201ENST00000611030 2440 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AC083964.2-201ENST00000623988 2396 ntBASIC10.89□□□□□ -0.67
LINC01546A6NGU7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms