Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC105917.1-201ENST00000506637 2539 ntBASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AL138799.1-201ENST00000448213 1675 ntBASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC024909.3-201ENST00000611513 2257 ntBASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AC023310.1-201ENST00000554836 735 ntBASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AC010328.2-201ENST00000597698 1111 ntBASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AC244669.2-201ENST00000612320 853 ntBASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AC132938.4-201ENST00000623835 848 ntBASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1G3Q9Y6M4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 PFN1P12-201ENST00000455938 534 ntBASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 BX539320.1-201ENST00000623759 877 ntBASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 AL596087.1-201ENST00000400979 1969 ntBASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms