Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AC097359.2-201ENST00000604992 2389 ntBASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 MTHFR-210ENST00000641407 2387 ntBASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AL450472.2-201ENST00000603663 1156 ntBASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AC008735.5-201ENST00000623544 497 ntBASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RCL1Q9Y2P8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.73□□□□□ -0.37
RCL1Q9Y2P8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms