Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP39A1Q9NYL5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 AL133338.1-201ENST00000565695 1517 ntBASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 EIF3FP3-201ENST00000434851 1086 ntBASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 C2orf69P2-201ENST00000562032 1123 ntBASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 ENPP7P14-201ENST00000621765 1040 ntBASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP39A1Q9NYL5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 HOMER2P2-201ENST00000451621 847 ntBASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 AC243960.2-201ENST00000600996 747 ntBASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CYP39A1Q9NYL5 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CYP39A1Q9NYL5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 AP005117.1-202ENST00000581724 1908 ntBASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 RPL5P21-201ENST00000404620 815 ntBASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 MIR1247-201ENST00000408206 136 ntBASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 AL118558.3-201ENST00000607414 1079 ntBASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CYP39A1Q9NYL5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms