Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 CYP4F24P-201ENST00000586049 1580 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC012618.1-201ENST00000461223 412 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC132192.2-201ENST00000596206 1147 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC137695.1-201ENST00000604126 489 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 AC007663.3-201ENST00000609632 465 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 AL662844.4-201ENST00000606367 2838 ntBASIC15.72■□□□□ 0.11
PHOX2BQ99453 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PHOX2BQ99453 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHOX2BQ99453 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC074338.1-201ENST00000416825 156 ntBASIC15.71■□□□□ 0.11
PHOX2BQ99453 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.71■□□□□ 0.11
PHOX2BQ99453 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 SERPINA13P-202ENST00000478994 924 ntBASIC15.71■□□□□ 0.11
PHOX2BQ99453 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC108673.2-201ENST00000608909 565 ntBASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC127024.7-201ENST00000625101 200 ntBASIC15.71■□□□□ 0.11
PHOX2BQ99453 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PHOX2BQ99453 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHOX2BQ99453 AC005052.1-201ENST00000625181 2492 ntBASIC15.71■□□□□ 0.1
PHOX2BQ99453 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PHOX2BQ99453 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PHOX2BQ99453 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PHOX2BQ99453 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.71■□□□□ 0.1
PHOX2BQ99453 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHOX2BQ99453 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms