Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 DUSP5P1-201ENST00000441325 1139 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC139272.1-201ENST00000505516 640 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AL358472.5-202ENST00000641448 1267 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 OLAH-201ENST00000378217 1767 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 DLX4-206ENST00000611342 1662 ntBASIC9.41□□□□□ -0.9
SVIPQ8NHG7 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 NR1H4-207ENST00000549996 1633 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 SLC16A6-205ENST00000620436 2055 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 SYT16-201ENST00000430451 2029 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.41□□□□□ -0.9
SVIPQ8NHG7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZSCAN29-204ENST00000562072 2345 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AL365181.1-201ENST00000564032 1828 ntBASIC9.4□□□□□ -0.9
SVIPQ8NHG7 HHAT-206ENST00000537898 3446 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 PDILT-201ENST00000302451 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 C22orf23-206ENST00000619227 1777 ntTSL 3 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 PRAMEF6-201ENST00000376189 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 PRAMEF6-202ENST00000415464 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 SNAP25-AS1-207ENST00000603542 3207 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZNF446-205ENST00000596341 3922 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 SLC25A14P1-201ENST00000502867 901 ntBASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AC010997.6-201ENST00000623230 1645 ntBASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 NPC1L1-202ENST00000381160 4141 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 AL117258.1-201ENST00000637218 2656 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SVIPQ8NHG7 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms