RNA–Protein interactions for RNA: ENST00000393054.5

ATP6V0A4-203, Transcript of ATPase H+ transporting V0 subunit a4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP6V0A4, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4-203ENST00000393054 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
ATP6V0A4-203ENST00000393054 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
ATP6V0A4-203ENST00000393054 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.84
ATP6V0A4-203ENST00000393054 HRCP23327 699 aa20.25■□□□□ 0.83
ATP6V0A4-203ENST00000393054 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
ATP6V0A4-203ENST00000393054 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.77
ATP6V0A4-203ENST00000393054 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
ATP6V0A4-203ENST00000393054 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
ATP6V0A4-203ENST00000393054 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
ATP6V0A4-203ENST00000393054 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
ATP6V0A4-203ENST00000393054 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
ATP6V0A4-203ENST00000393054 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
ATP6V0A4-203ENST00000393054 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
ATP6V0A4-203ENST00000393054 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
ATP6V0A4-203ENST00000393054 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
ATP6V0A4-203ENST00000393054 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
ATP6V0A4-203ENST00000393054 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
ATP6V0A4-203ENST00000393054 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
ATP6V0A4-203ENST00000393054 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
ATP6V0A4-203ENST00000393054 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
ATP6V0A4-203ENST00000393054 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
ATP6V0A4-203ENST00000393054 ABCC9O60706 1549 aa18.66■□□□□ 0.58
ATP6V0A4-203ENST00000393054 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
ATP6V0A4-203ENST00000393054 MYT1Q01538 1121 aa18.6■□□□□ 0.57
ATP6V0A4-203ENST00000393054 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.56
ATP6V0A4-203ENST00000393054 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.56
ATP6V0A4-203ENST00000393054 CENPBP07199 599 aaPredicted RBP18.56■□□□□ 0.56
ATP6V0A4-203ENST00000393054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
ATP6V0A4-203ENST00000393054 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
ATP6V0A4-203ENST00000393054 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
ATP6V0A4-203ENST00000393054 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
ATP6V0A4-203ENST00000393054 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
ATP6V0A4-203ENST00000393054 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
ATP6V0A4-203ENST00000393054 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
ATP6V0A4-203ENST00000393054 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
ATP6V0A4-203ENST00000393054 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
ATP6V0A4-203ENST00000393054 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
ATP6V0A4-203ENST00000393054 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
ATP6V0A4-203ENST00000393054 WIZO95785 1651 aa18.01■□□□□ 0.47
ATP6V0A4-203ENST00000393054 CEP162Q5TB80 1403 aa18■□□□□ 0.47
ATP6V0A4-203ENST00000393054 MIER1Q8N108 512 aa17.99■□□□□ 0.47
ATP6V0A4-203ENST00000393054 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
ATP6V0A4-203ENST00000393054 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.46
ATP6V0A4-203ENST00000393054 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
ATP6V0A4-203ENST00000393054 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
ATP6V0A4-203ENST00000393054 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
ATP6V0A4-203ENST00000393054 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
ATP6V0A4-203ENST00000393054 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
ATP6V0A4-203ENST00000393054 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
ATP6V0A4-203ENST00000393054 SOGA1O94964 1423 aa17.81■□□□□ 0.44
ATP6V0A4-203ENST00000393054 NACADO15069 1562 aa17.8■□□□□ 0.44
ATP6V0A4-203ENST00000393054 EEA1Q15075 1411 aa17.75■□□□□ 0.43
ATP6V0A4-203ENST00000393054 GOLGA3Q08378 1498 aa17.71■□□□□ 0.42
ATP6V0A4-203ENST00000393054 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
ATP6V0A4-203ENST00000393054 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
ATP6V0A4-203ENST00000393054 APLP2Q06481 763 aa17.68■□□□□ 0.42
ATP6V0A4-203ENST00000393054 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
ATP6V0A4-203ENST00000393054 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
ATP6V0A4-203ENST00000393054 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
ATP6V0A4-203ENST00000393054 CLIP1P30622 1438 aa17.57■□□□□ 0.4
ATP6V0A4-203ENST00000393054 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
ATP6V0A4-203ENST00000393054 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.4
ATP6V0A4-203ENST00000393054 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.39
ATP6V0A4-203ENST00000393054 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
ATP6V0A4-203ENST00000393054 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
ATP6V0A4-203ENST00000393054 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
ATP6V0A4-203ENST00000393054 KIF21BO75037 1637 aa17.43■□□□□ 0.38
ATP6V0A4-203ENST00000393054 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
ATP6V0A4-203ENST00000393054 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
ATP6V0A4-203ENST00000393054 BCANQ96GW7 911 aa17.36■□□□□ 0.37
ATP6V0A4-203ENST00000393054 RAPGEF2Q9Y4G8 1499 aa17.34■□□□□ 0.37
ATP6V0A4-203ENST00000393054 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
ATP6V0A4-203ENST00000393054 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
ATP6V0A4-203ENST00000393054 FKBP8Q14318 412 aa17.28■□□□□ 0.36
ATP6V0A4-203ENST00000393054 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
ATP6V0A4-203ENST00000393054 NEFLP07196 543 aa17.24■□□□□ 0.35
ATP6V0A4-203ENST00000393054 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
ATP6V0A4-203ENST00000393054 ITGAEP38570 1179 aa17.22■□□□□ 0.35
ATP6V0A4-203ENST00000393054 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
ATP6V0A4-203ENST00000393054 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
ATP6V0A4-203ENST00000393054 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
ATP6V0A4-203ENST00000393054 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
ATP6V0A4-203ENST00000393054 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
ATP6V0A4-203ENST00000393054 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
ATP6V0A4-203ENST00000393054 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATP6V0A4-203ENST00000393054 CUX2O14529 1486 aa17.1■□□□□ 0.33
ATP6V0A4-203ENST00000393054 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
ATP6V0A4-203ENST00000393054 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
ATP6V0A4-203ENST00000393054 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
ATP6V0A4-203ENST00000393054 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
ATP6V0A4-203ENST00000393054 ANP32CO43423 234 aa17.03■□□□□ 0.32
ATP6V0A4-203ENST00000393054 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
ATP6V0A4-203ENST00000393054 TOP2BQ02880 1626 aa17.02■□□□□ 0.32
ATP6V0A4-203ENST00000393054 MAPKBP1O60336 1514 aa17■□□□□ 0.31
ATP6V0A4-203ENST00000393054 SIN3AQ96ST3 1273 aa17■□□□□ 0.31
ATP6V0A4-203ENST00000393054 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
ATP6V0A4-203ENST00000393054 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
ATP6V0A4-203ENST00000393054 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
ATP6V0A4-203ENST00000393054 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
ATP6V0A4-203ENST00000393054 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms