RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
NPIPA1-201ENST00000328085 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
NPIPA1-201ENST00000328085 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
NPIPA1-201ENST00000328085 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
NPIPA1-201ENST00000328085 ABCC9O60706 1549 aa16.84■□□□□ 0.29
NPIPA1-201ENST00000328085 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
NPIPA1-201ENST00000328085 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
NPIPA1-201ENST00000328085 MYT1Q01538 1121 aa16.66■□□□□ 0.26
NPIPA1-201ENST00000328085 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
NPIPA1-201ENST00000328085 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
NPIPA1-201ENST00000328085 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
NPIPA1-201ENST00000328085 FOXD1Q16676 465 aa15.71■□□□□ 0.11
NPIPA1-201ENST00000328085 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPIPA1-201ENST00000328085 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
NPIPA1-201ENST00000328085 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
NPIPA1-201ENST00000328085 HRCP23327 699 aa15.54■□□□□ 0.08
NPIPA1-201ENST00000328085 NACADO15069 1562 aa15.32■□□□□ 0.04
NPIPA1-201ENST00000328085 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
NPIPA1-201ENST00000328085 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NPIPA1-201ENST00000328085 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NPIPA1-201ENST00000328085 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
NPIPA1-201ENST00000328085 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
NPIPA1-201ENST00000328085 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NPIPA1-201ENST00000328085 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
NPIPA1-201ENST00000328085 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
NPIPA1-201ENST00000328085 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
NPIPA1-201ENST00000328085 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
NPIPA1-201ENST00000328085 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
NPIPA1-201ENST00000328085 ADRA2BP18089 450 aa14.84□□□□□ -0.03
NPIPA1-201ENST00000328085 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
NPIPA1-201ENST00000328085 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
NPIPA1-201ENST00000328085 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NPIPA1-201ENST00000328085 CUX2O14529 1486 aa14.69□□□□□ -0.06
NPIPA1-201ENST00000328085 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
NPIPA1-201ENST00000328085 APLP2Q06481 763 aa14.66□□□□□ -0.06
NPIPA1-201ENST00000328085 CENPBP07199 599 aaPredicted RBP14.65□□□□□ -0.06
NPIPA1-201ENST00000328085 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
NPIPA1-201ENST00000328085 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
NPIPA1-201ENST00000328085 MSH5O43196 834 aa14.58□□□□□ -0.08
NPIPA1-201ENST00000328085 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
NPIPA1-201ENST00000328085 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
NPIPA1-201ENST00000328085 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.08
NPIPA1-201ENST00000328085 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
NPIPA1-201ENST00000328085 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
NPIPA1-201ENST00000328085 PCGF6Q9BYE7 350 aa14.42□□□□□ -0.1
NPIPA1-201ENST00000328085 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NPIPA1-201ENST00000328085 NESP48681 1621 aa14.26□□□□□ -0.13
NPIPA1-201ENST00000328085 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
NPIPA1-201ENST00000328085 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
NPIPA1-201ENST00000328085 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
NPIPA1-201ENST00000328085 ANP32EQ9BTT0 268 aa14.23□□□□□ -0.13
NPIPA1-201ENST00000328085 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
NPIPA1-201ENST00000328085 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.13
NPIPA1-201ENST00000328085 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
NPIPA1-201ENST00000328085 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
NPIPA1-201ENST00000328085 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
NPIPA1-201ENST00000328085 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
NPIPA1-201ENST00000328085 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
NPIPA1-201ENST00000328085 OSCARQ8IYS5 282 aa14□□□□□ -0.17
NPIPA1-201ENST00000328085 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
NPIPA1-201ENST00000328085 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
NPIPA1-201ENST00000328085 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
NPIPA1-201ENST00000328085 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
NPIPA1-201ENST00000328085 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
NPIPA1-201ENST00000328085 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
NPIPA1-201ENST00000328085 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
NPIPA1-201ENST00000328085 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NPIPA1-201ENST00000328085 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
NPIPA1-201ENST00000328085 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
NPIPA1-201ENST00000328085 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
NPIPA1-201ENST00000328085 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
NPIPA1-201ENST00000328085 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
NPIPA1-201ENST00000328085 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
NPIPA1-201ENST00000328085 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
NPIPA1-201ENST00000328085 WDR62O43379 1518 aa13.81□□□□□ -0.2
NPIPA1-201ENST00000328085 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
NPIPA1-201ENST00000328085 ERICH6BQ5W0A0 696 aa13.77□□□□□ -0.21
NPIPA1-201ENST00000328085 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
NPIPA1-201ENST00000328085 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
NPIPA1-201ENST00000328085 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
NPIPA1-201ENST00000328085 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
NPIPA1-201ENST00000328085 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
NPIPA1-201ENST00000328085 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
NPIPA1-201ENST00000328085 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
NPIPA1-201ENST00000328085 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
NPIPA1-201ENST00000328085 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
NPIPA1-201ENST00000328085 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NPIPA1-201ENST00000328085 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
NPIPA1-201ENST00000328085 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.23
NPIPA1-201ENST00000328085 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
NPIPA1-201ENST00000328085 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
NPIPA1-201ENST00000328085 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
NPIPA1-201ENST00000328085 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
NPIPA1-201ENST00000328085 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
NPIPA1-201ENST00000328085 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.25
NPIPA1-201ENST00000328085 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPA1-201ENST00000328085 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
NPIPA1-201ENST00000328085 CFTRP13569 1480 aa13.42□□□□□ -0.26
NPIPA1-201ENST00000328085 FBLN2P98095 1184 aa13.42□□□□□ -0.26
NPIPA1-201ENST00000328085 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms