RNA–Protein interactions for RNA: ENST00000521843.6

GRIA1-213, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 2 BASIC

Gene GRIA1, Length 3,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-213ENST00000521843 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
GRIA1-213ENST00000521843 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
GRIA1-213ENST00000521843 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
GRIA1-213ENST00000521843 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
GRIA1-213ENST00000521843 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
GRIA1-213ENST00000521843 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
GRIA1-213ENST00000521843 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
GRIA1-213ENST00000521843 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
GRIA1-213ENST00000521843 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
GRIA1-213ENST00000521843 ABCC9O60706 1549 aa17.27■□□□□ 0.35
GRIA1-213ENST00000521843 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
GRIA1-213ENST00000521843 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
GRIA1-213ENST00000521843 NACADO15069 1562 aa17.11■□□□□ 0.33
GRIA1-213ENST00000521843 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
GRIA1-213ENST00000521843 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
GRIA1-213ENST00000521843 HRCP23327 699 aa16.98■□□□□ 0.31
GRIA1-213ENST00000521843 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
GRIA1-213ENST00000521843 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
GRIA1-213ENST00000521843 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
GRIA1-213ENST00000521843 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
GRIA1-213ENST00000521843 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
GRIA1-213ENST00000521843 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
GRIA1-213ENST00000521843 WIZO95785 1651 aa16.71■□□□□ 0.26
GRIA1-213ENST00000521843 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
GRIA1-213ENST00000521843 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
GRIA1-213ENST00000521843 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
GRIA1-213ENST00000521843 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
GRIA1-213ENST00000521843 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
GRIA1-213ENST00000521843 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
GRIA1-213ENST00000521843 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
GRIA1-213ENST00000521843 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
GRIA1-213ENST00000521843 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
GRIA1-213ENST00000521843 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
GRIA1-213ENST00000521843 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
GRIA1-213ENST00000521843 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
GRIA1-213ENST00000521843 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
GRIA1-213ENST00000521843 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
GRIA1-213ENST00000521843 EEA1Q15075 1411 aa16.21■□□□□ 0.19
GRIA1-213ENST00000521843 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
GRIA1-213ENST00000521843 SOGA1O94964 1423 aa16.19■□□□□ 0.18
GRIA1-213ENST00000521843 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
GRIA1-213ENST00000521843 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
GRIA1-213ENST00000521843 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
GRIA1-213ENST00000521843 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
GRIA1-213ENST00000521843 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
GRIA1-213ENST00000521843 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
GRIA1-213ENST00000521843 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
GRIA1-213ENST00000521843 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
GRIA1-213ENST00000521843 GOLGA3Q08378 1498 aa16.06■□□□□ 0.16
GRIA1-213ENST00000521843 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
GRIA1-213ENST00000521843 TTBK1Q5TCY1 1321 aaPredicted RBP16.02■□□□□ 0.16
GRIA1-213ENST00000521843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
GRIA1-213ENST00000521843 MYT1Q01538 1121 aa16■□□□□ 0.15
GRIA1-213ENST00000521843 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
GRIA1-213ENST00000521843 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
GRIA1-213ENST00000521843 KIF21BO75037 1637 aa15.91■□□□□ 0.14
GRIA1-213ENST00000521843 CLIP1P30622 1438 aa15.87■□□□□ 0.13
GRIA1-213ENST00000521843 APLP2Q06481 763 aa15.83■□□□□ 0.13
GRIA1-213ENST00000521843 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
GRIA1-213ENST00000521843 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
GRIA1-213ENST00000521843 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
GRIA1-213ENST00000521843 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
GRIA1-213ENST00000521843 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
GRIA1-213ENST00000521843 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.11
GRIA1-213ENST00000521843 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
GRIA1-213ENST00000521843 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
GRIA1-213ENST00000521843 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
GRIA1-213ENST00000521843 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
GRIA1-213ENST00000521843 CFTRP13569 1480 aa15.68■□□□□ 0.1
GRIA1-213ENST00000521843 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
GRIA1-213ENST00000521843 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
GRIA1-213ENST00000521843 CUX1P39880 1505 aa15.67■□□□□ 0.1
GRIA1-213ENST00000521843 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
GRIA1-213ENST00000521843 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
GRIA1-213ENST00000521843 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
GRIA1-213ENST00000521843 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
GRIA1-213ENST00000521843 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.07
GRIA1-213ENST00000521843 ACIN1Q9UKV3 1341 aaKnown RBP15.5■□□□□ 0.07
GRIA1-213ENST00000521843 CUX2O14529 1486 aa15.5■□□□□ 0.07
GRIA1-213ENST00000521843 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
GRIA1-213ENST00000521843 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
GRIA1-213ENST00000521843 IGF1RP08069 1367 aa15.46■□□□□ 0.07
GRIA1-213ENST00000521843 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
GRIA1-213ENST00000521843 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
GRIA1-213ENST00000521843 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
GRIA1-213ENST00000521843 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
GRIA1-213ENST00000521843 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
GRIA1-213ENST00000521843 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
GRIA1-213ENST00000521843 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
GRIA1-213ENST00000521843 CCNB3Q8WWL7 1395 aa15.37■□□□□ 0.05
GRIA1-213ENST00000521843 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
GRIA1-213ENST00000521843 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
GRIA1-213ENST00000521843 ITGAEP38570 1179 aa15.32■□□□□ 0.04
GRIA1-213ENST00000521843 GTF3C3Q9Y5Q9 886 aa15.31■□□□□ 0.04
GRIA1-213ENST00000521843 MIER1Q8N108 512 aa15.3■□□□□ 0.04
GRIA1-213ENST00000521843 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
GRIA1-213ENST00000521843 MAP3K1Q13233 1512 aa15.3■□□□□ 0.04
GRIA1-213ENST00000521843 YTHDC1Q96MU7 727 aaKnown RBP15.28■□□□□ 0.04
GRIA1-213ENST00000521843 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
GRIA1-213ENST00000521843 TIAM1Q13009 1591 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms