Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 KRT18P66-201ENST00000452970 1269 ntBASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 SCARNA20.5-201ENST00000516991 142 ntBASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC17A8Q8NDX2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SLC17A8Q8NDX2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 AC018892.3-201ENST00000623986 2499 ntBASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC17A8Q8NDX2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 TARDBPP1-201ENST00000442013 1203 ntBASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AP001527.2-201ENST00000614441 631 ntBASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC17A8Q8NDX2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms