Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF549Q6P9A3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC241585.1-201ENST00000433527 519 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC114501.2-201ENST00000439631 535 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AL390955.2-201ENST00000603032 514 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC025181.2-201ENST00000606994 802 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC138969.3-201ENST00000546612 1459 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC138932.2-201ENST00000548268 1459 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 AC126755.4-201ENST00000549796 1459 ntBASIC15.4■□□□□ 0.06
ZNF549Q6P9A3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC055876.3-201ENST00000431496 288 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 KRT18P43-201ENST00000469825 1281 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 SPDYE18-201ENST00000510091 1050 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 IGHV3-42-201ENST00000520410 361 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC138649.4-201ENST00000612222 287 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 AL390754.1-201ENST00000619088 582 ntBASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF549Q6P9A3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms