Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC019294.4-201ENST00000561777 2905 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 PMS2P4-201ENST00000412466 1052 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC106795.1-205ENST00000512851 1056 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 KRT18P21-201ENST00000515767 1272 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MIR3909-201ENST00000579518 119 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AP002414.4-201ENST00000589764 1148 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC099336.1-202ENST00000602961 463 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 AC018442.1-201ENST00000421439 2061 ntBASIC14.67□□□□□ -0.06
LPCAT4Q643R3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.67□□□□□ -0.06
LPCAT4Q643R3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AL691432.1-201ENST00000596308 1422 ntBASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AC243562.2-201ENST00000561247 970 ntBASIC14.66□□□□□ -0.06
LPCAT4Q643R3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AC002347.1-201ENST00000569543 541 ntBASIC14.66□□□□□ -0.06
LPCAT4Q643R3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 MTDHP4-201ENST00000600287 670 ntBASIC14.66□□□□□ -0.06
LPCAT4Q643R3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms