Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 FAM220BP-201ENST00000377689 816 ntBASIC17.11■□□□□ 0.33
TSR1Q2NL82 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 FAM86C2P-203ENST00000528684 1004 ntBASIC17.11■□□□□ 0.33
TSR1Q2NL82 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TSR1Q2NL82 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TSR1Q2NL82 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 FGD5P1-202ENST00000614866 2498 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 MIR940-201ENST00000401276 94 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 AL671277.1-201ENST00000429656 993 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 AC007967.2-201ENST00000432613 625 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 KRT18P2-201ENST00000447938 1258 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 POLD2P1-201ENST00000511220 997 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 CYP4F24P-201ENST00000586049 1580 ntBASIC17.1■□□□□ 0.33
TSR1Q2NL82 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TSR1Q2NL82 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.1■□□□□ 0.33
TSR1Q2NL82 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 AC232323.1-201ENST00000540724 2099 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 REXO1L5P-201ENST00000622260 2098 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 TFAMP1-201ENST00000412727 736 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 RNA5SP416-201ENST00000516838 111 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 AC140113.2-201ENST00000604370 208 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 AC099522.2-201ENST00000607001 744 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 FOXO1B-201ENST00000504678 1527 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 ZBED1P1-201ENST00000502364 1930 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TSR1Q2NL82 AL390755.1-201ENST00000623716 2027 ntBASIC17.09■□□□□ 0.33
TSR1Q2NL82 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TSR1Q2NL82 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms