Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 RPL7P3-201ENST00000441388 714 ntBASIC14.28□□□□□ -0.12
EXT1Q16394 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 FTH1P14-201ENST00000482930 551 ntBASIC14.28□□□□□ -0.12
EXT1Q16394 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.28□□□□□ -0.12
EXT1Q16394 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 AP000812.2-201ENST00000538934 718 ntBASIC14.28□□□□□ -0.12
EXT1Q16394 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.28□□□□□ -0.12
EXT1Q16394 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.28□□□□□ -0.12
EXT1Q16394 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.28□□□□□ -0.12
EXT1Q16394 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.28□□□□□ -0.12
EXT1Q16394 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.28□□□□□ -0.12
EXT1Q16394 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 PRSS30P-206ENST00000641773 873 ntBASIC14.28□□□□□ -0.12
EXT1Q16394 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.28□□□□□ -0.12
EXT1Q16394 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EXT1Q16394 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.27□□□□□ -0.12
EXT1Q16394 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.12
EXT1Q16394 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.27□□□□□ -0.12
EXT1Q16394 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 AC105250.1-201ENST00000509378 2057 ntBASIC14.27□□□□□ -0.12
EXT1Q16394 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
EXT1Q16394 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 AC007787.1-201ENST00000588095 1583 ntBASIC14.27□□□□□ -0.12
EXT1Q16394 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.27□□□□□ -0.12
EXT1Q16394 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
EXT1Q16394 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EXT1Q16394 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.27□□□□□ -0.13
EXT1Q16394 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 ACTBP8-201ENST00000403258 1108 ntBASIC14.27□□□□□ -0.13
EXT1Q16394 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 KLF2P2-201ENST00000416807 1039 ntBASIC14.27□□□□□ -0.13
EXT1Q16394 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 RPS2P32-201ENST00000439199 892 ntBASIC14.27□□□□□ -0.13
EXT1Q16394 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.27□□□□□ -0.13
EXT1Q16394 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.27□□□□□ -0.13
EXT1Q16394 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 SNX29P1-201ENST00000548357 1007 ntBASIC14.27□□□□□ -0.13
EXT1Q16394 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 SAMD11P1-201ENST00000571429 661 ntBASIC14.27□□□□□ -0.13
EXT1Q16394 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.27□□□□□ -0.13
EXT1Q16394 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EXT1Q16394 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.27□□□□□ -0.13
EXT1Q16394 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms