Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PRAMEP78395 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEP78395 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 AL512361.1-201ENST00000554200 418 ntBASIC15.71■□□□□ 0.11
PRAMEP78395 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.71■□□□□ 0.11
PRAMEP78395 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEP78395 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.71■□□□□ 0.11
PRAMEP78395 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRAMEP78395 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 Z97205.2-201ENST00000564697 1639 ntBASIC15.71■□□□□ 0.11
PRAMEP78395 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRAMEP78395 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PRAMEP78395 AL009178.2-201ENST00000597278 2719 ntBASIC15.71■□□□□ 0.11
PRAMEP78395 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
PRAMEP78395 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.71■□□□□ 0.1
PRAMEP78395 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEP78395 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.71■□□□□ 0.1
PRAMEP78395 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.71■□□□□ 0.1
PRAMEP78395 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.71■□□□□ 0.1
PRAMEP78395 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.71■□□□□ 0.1
PRAMEP78395 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.71■□□□□ 0.1
PRAMEP78395 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEP78395 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PRAMEP78395 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.7■□□□□ 0.1
PRAMEP78395 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEP78395 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEP78395 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.7■□□□□ 0.1
PRAMEP78395 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEP78395 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 AL158211.3-201ENST00000607385 239 ntBASIC15.7■□□□□ 0.1
PRAMEP78395 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PRAMEP78395 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEP78395 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRAMEP78395 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEP78395 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEP78395 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEP78395 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEP78395 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms