Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SLC6A9P48067 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC6A9P48067 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC6A9P48067 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
SLC6A9P48067 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLC6A9P48067 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.79□□□□□ -0.2
SLC6A9P48067 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 AC109322.1-201ENST00000524499 1264 ntBASIC13.79□□□□□ -0.2
SLC6A9P48067 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC6A9P48067 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC6A9P48067 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.79□□□□□ -0.2
SLC6A9P48067 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC6A9P48067 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC6A9P48067 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AL109954.1-202ENST00000564051 2148 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SLC6A9P48067 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC6A9P48067 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC6A9P48067 BANF1P1-201ENST00000553684 263 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 HNRNPUP1-201ENST00000554987 333 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AL355385.1-201ENST00000606123 409 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 AP001059.3-201ENST00000619053 235 ntBASIC13.78□□□□□ -0.2
SLC6A9P48067 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC6A9P48067 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC6A9P48067 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms