Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 AL358472.5-202ENST00000641448 1267 ntBASIC14.99□□□□□ -0.01
CAPN3P20807 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.99□□□□□ -0.01
CAPN3P20807 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.98□□□□□ -0.01
CAPN3P20807 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CAPN3P20807 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 AZGP1P1-201ENST00000411909 902 ntBASIC14.98□□□□□ -0.01
CAPN3P20807 TFAMP1-201ENST00000412727 736 ntBASIC14.98□□□□□ -0.01
CAPN3P20807 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.98□□□□□ -0.01
CAPN3P20807 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.98□□□□□ -0.01
CAPN3P20807 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.98□□□□□ -0.01
CAPN3P20807 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.98□□□□□ -0.01
CAPN3P20807 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.98□□□□□ -0.01
CAPN3P20807 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.98□□□□□ -0.01
CAPN3P20807 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.98□□□□□ -0.01
CAPN3P20807 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CAPN3P20807 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CAPN3P20807 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CAPN3P20807 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.98□□□□□ -0.01
CAPN3P20807 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CAPN3P20807 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
CAPN3P20807 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.97□□□□□ -0.01
CAPN3P20807 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CAPN3P20807 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.97□□□□□ -0.01
CAPN3P20807 HLA-H-201ENST00000383620 1096 ntBASIC14.97□□□□□ -0.01
CAPN3P20807 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.97□□□□□ -0.01
CAPN3P20807 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN3P20807 CNN2P2-201ENST00000443536 909 ntBASIC14.97□□□□□ -0.01
CAPN3P20807 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 CNN2P3-201ENST00000450201 906 ntBASIC14.97□□□□□ -0.01
CAPN3P20807 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CAPN3P20807 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.97□□□□□ -0.01
CAPN3P20807 AC093520.2-201ENST00000561830 333 ntBASIC14.97□□□□□ -0.01
CAPN3P20807 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms