Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 AC134915.1-201ENST00000426461 574 ntBASIC16.32■□□□□ 0.2
LCP1P13796 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 AP005018.1-201ENST00000525475 301 ntBASIC16.32■□□□□ 0.2
LCP1P13796 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.32■□□□□ 0.2
LCP1P13796 LINC00554-201ENST00000564841 3011 ntBASIC16.32■□□□□ 0.2
LCP1P13796 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LCP1P13796 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCP1P13796 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 AC092384.3-202ENST00000564646 2873 ntBASIC16.31■□□□□ 0.2
LCP1P13796 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
LCP1P13796 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.31■□□□□ 0.2
LCP1P13796 RPL13AP25-201ENST00000484130 612 ntBASIC16.31■□□□□ 0.2
LCP1P13796 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.31■□□□□ 0.2
LCP1P13796 AL359711.2-201ENST00000563105 872 ntBASIC16.31■□□□□ 0.2
LCP1P13796 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.31■□□□□ 0.2
LCP1P13796 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.31■□□□□ 0.2
LCP1P13796 WFDC1-204ENST00000613603 549 ntBASIC16.31■□□□□ 0.2
LCP1P13796 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LCP1P13796 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
LCP1P13796 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LCP1P13796 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.31■□□□□ 0.2
LCP1P13796 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCP1P13796 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
LCP1P13796 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.3■□□□□ 0.2
LCP1P13796 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.3■□□□□ 0.2
LCP1P13796 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 DRD5P1-201ENST00000456605 1438 ntBASIC16.3■□□□□ 0.2
LCP1P13796 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCP1P13796 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms