Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 HLA-H-201ENST00000383620 1096 ntBASIC16.85■□□□□ 0.29
RNF40O75150 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RNF40O75150 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 RN7SL692P-201ENST00000464677 288 ntBASIC16.85■□□□□ 0.29
RNF40O75150 HLA-V-204ENST00000476601 1289 ntBASIC16.85■□□□□ 0.29
RNF40O75150 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF40O75150 AL596325.1-201ENST00000563991 1082 ntBASIC16.85■□□□□ 0.29
RNF40O75150 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RNF40O75150 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RNF40O75150 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF40O75150 FOXO1B-201ENST00000504678 1527 ntBASIC16.85■□□□□ 0.29
RNF40O75150 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF40O75150 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF40O75150 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 CR383656.12-201ENST00000549567 513 ntBASIC16.84■□□□□ 0.29
RNF40O75150 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF40O75150 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.84■□□□□ 0.29
RNF40O75150 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNF40O75150 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF40O75150 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF40O75150 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF40O75150 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.83■□□□□ 0.29
RNF40O75150 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RNF40O75150 MIR600HG-201ENST00000449175 5984 ntBASIC16.83■□□□□ 0.29
RNF40O75150 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF40O75150 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF40O75150 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
RNF40O75150 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF40O75150 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
RNF40O75150 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms