Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RIPK2O43353 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
RIPK2O43353 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.77■□□□□ 0.12
RIPK2O43353 AC007967.2-201ENST00000432613 625 ntBASIC15.77■□□□□ 0.12
RIPK2O43353 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.77■□□□□ 0.12
RIPK2O43353 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RIPK2O43353 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.77■□□□□ 0.12
RIPK2O43353 KRT18P56-201ENST00000507275 550 ntBASIC15.77■□□□□ 0.12
RIPK2O43353 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.77■□□□□ 0.12
RIPK2O43353 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.77■□□□□ 0.12
RIPK2O43353 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.77■□□□□ 0.12
RIPK2O43353 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.77■□□□□ 0.12
RIPK2O43353 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RIPK2O43353 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RIPK2O43353 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.77■□□□□ 0.11
RIPK2O43353 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.77■□□□□ 0.11
RIPK2O43353 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.77■□□□□ 0.11
RIPK2O43353 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RIPK2O43353 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RIPK2O43353 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.77■□□□□ 0.11
RIPK2O43353 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.77■□□□□ 0.11
RIPK2O43353 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.77■□□□□ 0.11
RIPK2O43353 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RIPK2O43353 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RIPK2O43353 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.76■□□□□ 0.11
RIPK2O43353 MIR1224-201ENST00000408193 85 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.76■□□□□ 0.11
RIPK2O43353 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.76■□□□□ 0.11
RIPK2O43353 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 AC145285.3-201ENST00000564603 959 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 RN7SL510P-201ENST00000581311 263 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RIPK2O43353 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.76■□□□□ 0.11
RIPK2O43353 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 AC104109.2-201ENST00000602919 1418 ntBASIC15.76■□□□□ 0.11
RIPK2O43353 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RIPK2O43353 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RIPK2O43353 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 AC010327.5-201ENST00000586923 3061 ntBASIC15.75■□□□□ 0.11
RIPK2O43353 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.75■□□□□ 0.11
RIPK2O43353 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RIPK2O43353 REXO1L4P-201ENST00000605109 1937 ntBASIC15.75■□□□□ 0.11
RIPK2O43353 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.75■□□□□ 0.11
RIPK2O43353 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.75■□□□□ 0.11
RIPK2O43353 AC243562.1-201ENST00000560672 389 ntBASIC15.75■□□□□ 0.11
RIPK2O43353 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 LINC01225-203ENST00000563550 1244 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms