Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 ACE3P-201ENST00000423435 1973 ntBASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV5A0A0B4J249 AC067750.1-201ENST00000608826 6545 ntBASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 AC142381.1-201ENST00000426099 345 ntBASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 PDPK2P-202ENST00000562415 1191 ntBASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 AC034105.1-201ENST00000563488 319 ntBASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV5A0A0B4J249 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 WASH3P-207ENST00000560956 1394 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 FO538757.1-201ENST00000623083 1397 ntBASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV5A0A0B4J249 TFAMP1-201ENST00000412727 736 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms