Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 FO538757.1-201ENST00000623083 1397 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC068418.2-201ENST00000577309 3703 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC138035.3-201ENST00000622706 2791 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AL139400.1-201ENST00000366220 510 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC107890.1-201ENST00000422478 521 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AL645939.2-201ENST00000427340 991 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 RN7SL618P-201ENST00000477850 296 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC067863.1-201ENST00000494933 530 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC069120.2-201ENST00000524091 540 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AP001160.2-201ENST00000596071 487 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC097359.3-201ENST00000603982 1210 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 AC093028.1-201ENST00000622998 982 ntBASIC11.31□□□□□ -0.6
TRGV1A0A0A0MS02 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms