Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 RN7SL602P-201ENST00000578326 324 ntBASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC015910.1-201ENST00000579400 975 ntBASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC138969.3-201ENST00000546612 1459 ntBASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC138932.2-201ENST00000548268 1459 ntBASIC15.06■□□□□ 0
CUEDC1Q9NWM3 AC126755.4-201ENST00000549796 1459 ntBASIC15.06■□□□□ 0
CUEDC1Q9NWM3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CUEDC1Q9NWM3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 KRT18P43-201ENST00000469825 1281 ntBASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 TP53TG3HP-202ENST00000569755 579 ntBASIC15.05■□□□□ -0
CUEDC1Q9NWM3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 AL606495.2-201ENST00000605867 535 ntBASIC15.05■□□□□ -0
CUEDC1Q9NWM3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 CLK3P2-201ENST00000427566 1453 ntBASIC15.05■□□□□ -0
CUEDC1Q9NWM3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms