Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GNRHR2-203ENST00000581100 1187 ntBASIC16.09■□□□□ 0.17
HPS4Q9NQG7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 AC068587.6-202ENST00000641839 5619 ntBASIC16.09■□□□□ 0.17
HPS4Q9NQG7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HPS4Q9NQG7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HPS4Q9NQG7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HPS4Q9NQG7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HPS4Q9NQG7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HPS4Q9NQG7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 FAM21FP-201ENST00000426241 1131 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC022137.2-201ENST00000503482 481 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 KRT90P-201ENST00000549264 1064 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC015910.1-201ENST00000579400 975 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC107373.2-201ENST00000607735 490 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 GPR182-203ENST00000622922 591 ntBASIC16.08■□□□□ 0.16
HPS4Q9NQG7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HPS4Q9NQG7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 AC026954.1-201ENST00000429771 1293 ntBASIC16.07■□□□□ 0.16
HPS4Q9NQG7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HPS4Q9NQG7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms