Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 AC131902.2-201ENST00000566892 2172 ntBASIC13.64□□□□□ -0.23
C12orf4Q9NQ89 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AL121912.1-201ENST00000603683 238 ntBASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AC012313.10-201ENST00000623509 926 ntBASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SSR4P1-203ENST00000599569 2260 ntBASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AC006504.5-208ENST00000588784 2401 ntBASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 DNM1P41-201ENST00000623634 3350 ntBASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C12orf4Q9NQ89 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 BEND3P1-201ENST00000421591 1944 ntBASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 TMBIM7P-203ENST00000641617 1718 ntBASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
C12orf4Q9NQ89 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms