Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC011506.1-201ENST00000474329 610 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 MIR6786-201ENST00000616843 113 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AL049757.1-201ENST00000616842 1596 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 U82695.1-201ENST00000635752 1889 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC134407.2-201ENST00000625089 1978 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 MFAP1P1-201ENST00000442257 1255 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 B3GAT3P1-201ENST00000471720 806 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 WASH6P-202ENST00000359512 1437 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC010336.1-201ENST00000539278 4739 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC102953.2-201ENST00000609755 3026 ntBASIC11.31□□□□□ -0.6
VAMP8Q9BV40 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VAMP8Q9BV40 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.3□□□□□ -0.6
VAMP8Q9BV40 AC127383.1-201ENST00000444697 1800 ntBASIC11.3□□□□□ -0.6
VAMP8Q9BV40 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VAMP8Q9BV40 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VAMP8Q9BV40 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VAMP8Q9BV40 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms