Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AL139384.1-201ENST00000612143 3047 ntBASIC26.4■■□□□ 1.82
TRIM41Q8WV44 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM41Q8WV44 ILF3-AS1-201ENST00000591501 1983 ntBASIC26.4■■□□□ 1.82
TRIM41Q8WV44 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC26.4■■□□□ 1.82
TRIM41Q8WV44 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM41Q8WV44 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 KRT90P-201ENST00000549264 1064 ntBASIC26.39■■□□□ 1.82
TRIM41Q8WV44 NPM1P43-201ENST00000558669 786 ntBASIC26.39■■□□□ 1.82
TRIM41Q8WV44 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 AP001065.2-201ENST00000617205 644 ntBASIC26.39■■□□□ 1.82
TRIM41Q8WV44 HADH-212ENST00000638621 741 ntTSL 5 BASIC26.39■■□□□ 1.82
TRIM41Q8WV44 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 AC092127.1-201ENST00000567093 3455 ntBASIC26.39■■□□□ 1.81
TRIM41Q8WV44 AP005117.1-202ENST00000581724 1908 ntBASIC26.39■■□□□ 1.81
TRIM41Q8WV44 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM41Q8WV44 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 CICP13-201ENST00000422015 2789 ntBASIC26.38■■□□□ 1.81
TRIM41Q8WV44 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC26.38■■□□□ 1.81
TRIM41Q8WV44 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 POLL-217ENST00000628479 1953 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 AC134915.1-201ENST00000426461 574 ntBASIC26.37■■□□□ 1.81
TRIM41Q8WV44 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SUPT4H1P2-201ENST00000501248 353 ntBASIC26.37■■□□□ 1.81
TRIM41Q8WV44 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 FTLP5-201ENST00000586853 534 ntBASIC26.37■■□□□ 1.81
TRIM41Q8WV44 UBL5-208ENST00000593087 320 ntTSL 3 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM41Q8WV44 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 SPTLC1P5-201ENST00000450718 252 ntBASIC26.36■■□□□ 1.81
TRIM41Q8WV44 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM41Q8WV44 AC023310.1-201ENST00000554836 735 ntBASIC26.36■■□□□ 1.81
TRIM41Q8WV44 AC120045.2-201ENST00000567334 178 ntBASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms