Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 AL645728.1-201ENST00000366221 2101 ntBASIC12.19□□□□□ -0.46
C3orf56Q8N813 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
C3orf56Q8N813 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
C3orf56Q8N813 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 KRT8P35-201ENST00000483942 1338 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 TPM3P8-201ENST00000330554 643 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC245100.5-201ENST00000452108 331 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 CHMP4BP1-201ENST00000556017 588 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC097724.1-201ENST00000609581 426 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC007663.3-201ENST00000609632 465 ntBASIC12.18□□□□□ -0.46
C3orf56Q8N813 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.18□□□□□ -0.46
C3orf56Q8N813 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C3orf56Q8N813 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.17□□□□□ -0.46
C3orf56Q8N813 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.17□□□□□ -0.46
C3orf56Q8N813 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
C3orf56Q8N813 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
C3orf56Q8N813 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 UBALD1-205ENST00000590891 2641 ntBASIC12.17□□□□□ -0.46
C3orf56Q8N813 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C3orf56Q8N813 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms